DOSim package

Emali:riverlee2008@gmail.com/lijiang711@gmail.com
MSN:  riverlee2008@live.cn
Tel:  +86-13936514493
ADD:  Harbin Medical University
Download Obesity related Genes

Description

DOSim is developed on DO to 1) measure the similarity between diseases (DO terms), 2) measure the similarity between human genes in terms of diseases, 3) detect DO-driven gene modules and multilayer annotate them on dieases (DO), functions(GO) and pathways(KEGG), 4) conduct DO enrichment analysis, and 5) visualize and describe DO structures and terms. It focuses on the computation of disease similarity and gene similarity. Besides, its module detection and annotation would promote our understanding of the complex pathogenesis of diseases.

Summary

Package: DOSim
Depends: GOSim, SubpathwayMiner, dynamicTreeCut, moduleColor, RBGL, graph
Version: 2.0
Date: 2010-08-5
License: GPL (>= 2)
LazyLoad: yes

Author(s)

Name: Jiang Li

Email:riverlee2008@gmail.com

Package Downloads

Package source: DOSim_2.0.tar.gz
Windows 32-bit binary: DOSim_2.0.zip
MacOS X binary: Coming soon

Documentation

Other Versions

list all versions

module
Application for gene module detction

dograph
The flow chart of Disease Ontology

dograph
Sub-graph of disease ontology




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